Dalila Cunha de Oliveira

3 Questions 6 Answers 0 Followers

Questions related from Dalila Cunha de Oliveira

Call differential binding events, peak score (MACS)?

I am comparing 2 conditinos (negative control and treatment) in a Chip-seq experiment. I used MACS 2 (Call differential binding...

06 April 2016 4,004 1 View

ChIp-seq data analysis (heat maps). Any advice on measurement and normalization between treatments?

I am analysing some ChIP-seq data of a histone modification and different treatments. I am new on bioinformatics. What I have so far are the peak calling and the differential binding events (using...

02 March 2016 8,120 1 View

Some advice for negative control genes in ChIP qPCR?

I have done ChIP qPCR in macrophages, the negative control gene that I used was OCT4, it worked well, means, It did not amplyfied. Now I am doing experiments with another antibody and I noticed...

15 January 2016 574 2 View