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Questions related from Chandrasekar Arumugam
Can anyone help me to identify miRNAs from Assembled Transcriptome (multi fasta contig files around 45,000). I checked with mirBase but it has some limitations. I did a local BLAST using mature...
29 January 2020 4,654 3 View
Dear All, How to analyse Gene ontology for the blast results like Standalone Blast ? BLAST2GO is now become a limited analysis in Trail. Kindly anyone suggest a new tool for GO analysis
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Dear all, I have downloaded DGE tag reads from NCBI SRA, I need to know how to align, assemble and annotate the DGE tags. I have used tophat and cufflinks but it is not working. Kindly help me in...
02 March 2018 3,099 1 View
bioinfo@bioinfo-nrcb:~$ tophat --output-dir Tophat/out --num-threads 6 --read-mismatches 2 --read-edit-dist 2 --read-realign-edit-dist 1000 -a 8 -m 0 -i 70 -I 500000 -g 20 --min-segment-intron 50...
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RAD sequencing A D'Hont Heslop
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