Atul Kumar Kashyap

4 Questions 8 Answers 0 Followers

Questions related from Atul Kumar Kashyap

Should overrepresented sequences be retained or trimmed in small RNA sequencing data?

In small RNA sequencing data analysis, I have encountered overrepresented sequences. When processing such data, should overrepresented sequences be retained or trimmed? What are the potential...

11 March 2024 432 2 View

What are the right standard (standard 1 & 2) values of Qubit RNA BR quanitification, so as to accurately quanity RNA samples ?

Before the quantification of RNA samples, I ran the standards twice and observed two different readings. 1st observations: Std 1 = 212.07 & Std 2 = 2278.50. 2nd observations: Std 1 = 149.24...

20 July 2023 8,559 1 View

Is it possible to index a human genome on apple Mac M1 (16gb) using bowtie?

Apple's M1 mac is there in the market since 2020, but its application and compatability with bioinformatics analysis tools is scarcely discussed. For example, is it possible to index a human...

05 April 2022 8,658 16 View

While doing GO enrichment analysis, what to choose : p value or adjusted p value and why?

If I choose p-value, there are a lot of GO terms that are significant (

23 January 2021 5,369 6 View