Atilio Reyes Romero

6 Questions 4 Answers 0 Followers

Questions related from Atilio Reyes Romero

Does a macrocycles database exist for fishing some knowledge from nature and from the drugs already in use in the market?

I am doing molecular modeling about macrocycles in drug discovery and I was wondering if a specific database where natural and drug-like ones are deposited. The idea consists in comparing their...

04 April 2017 8,761 4 View

What is the extinction coefficient of NADH and NAD+ at 280 nm?

I have an enzyme that has NADH. I don't know which form (protonated or not) is bound to the protein or if the co-factor is inside the enzyme. How is possible to determine these forms? Any hits to...

01 January 2017 9,564 0 View

What is the difference between BLR and BLR (DE3)?

I am pretty new in the field of protein purification. Normally I use AHT (anhydrotetracycline) to induce E coli BLR strain and p-ask-IBA3 as vector. Is there any difference between using BLR and...

12 December 2016 7,540 4 View

Which computational software is suitable to calculate the binding energy of water molecules?

I would like to get the binding energy of water molecules. Does anybody know a free software or a way to do it (such as is pymol)?

10 October 2016 3,386 0 View

How to design a DNA sequence from an already known protein one?

What I normally do is get the protein primary sequence from the PDB and I order the right sequence of the DNA from the company. Any suggestion/tutorial?

09 September 2016 7,669 4 View

What is the most efficient method to make a complex of two molecules?

I need to merge two molecules and optimize interactions. I have Pymol, Jchem package from chemaxon and Babel as softwares.

09 September 2016 9,147 4 View