Arjun Sahoo

8 Questions 9 Answers 0 Followers

Questions related from Arjun Sahoo

Can anybody help me please to resolve the orthofinder installaton issues?

Traceback (most recent call last): File "/home/user/Downloads/OrthoFinder-master/orthofinder/orthofinder.py", line 27, in from scripts import parallel_task_manager File...

23 August 2019 1,984 0 View

Is there any software that will help to present the read coverage in the form of graphs?Could anybody kindly help me to resolve the issue?

I am mapping the raw reads to the contigs generated by de novo assembly of the same reads and want to represent the read coverage in the form of graph..

23 September 2016 2,513 5 View

Could anybody help me to overcome the DNA isolation problem from fish gut content?

I am interested to study the microbial diversity of fish gut content. I am using QIAmp DNA stool mini kit for isolation of microbial DNA from fish gut contentas per manufacturers instruction, but...

24 May 2016 5,514 5 View

How to output assembly results into a specified folder with abyss-pe?

Good afternoon everybody. I am new to next gen sequence analysis and also Linux. I am using abyss to assemble Illumina short read sequences. One problem i am facing that the output files of abyss...

05 May 2016 2,864 3 View

For linkage mapping in F1 population of an out bred population, which techniques will be better, ddRAD or GBS?

I am working on one of the indigenous fish species and want to construct a linkage map using advanced techniques like ddRAD or GBS.

23 July 2015 1,441 4 View

Facing problems in calculating population genetic parameters

I am trying to analyse microsatellite genotyping data in Arlequin software after converting it to .arp file. But the problem is that in the result sheet Pairwise Fst value and AMOVA don't come...

20 December 2012 7,186 1 View

I wish to clone and characterize a gene in a species in which its sequence is not available. Can anyone suggest how I can proceed?

Since its sequence information is not available which method should I follow?

17 April 2012 3,612 3 View

Can anyone suggest open source user friendly software for analysis of transcriptome data?

Analysis of short reads is difficult and I have limited knowledge in bioinformatics.

17 April 2012 3,006 41 View