What visualization tool do you use for brain connectivity?

Adolfo Flores Saiffe @Adolfo_Flores_Saiffe2

09 September 2018 1 2K Report

I have used the BrainViewer for MATLAB, but since i have migrated to python, I do not know any package that helps for a nice publication-quality images of connectivity.

Belal Medhat

You can access various neuro-image file formats using NiBabel

http://nipy.org/nibabel/

and you can visualize the brain using the following Python Packages

visbrain, Pysurfer NiLearn,

http://nilearn.github.io

https://pypi.org/project/visbrain/

https://pysurfer.github.io/intro.html

Finally, Python packages for Brain Connectivity

https://github.com/aestrivex/bctpy

https://github.com/tsalo/brainconn

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