What softwares can be used to dock protein with lipid? Are there any web-based tools?
Protein- ligand docking can be performed with various softwares, but Schrodinger ¨ Maestro gives good result for in silico studies.
HyperChem, HyperProtein!
Autodock software is good for docking lipids to proteins
http://autodock.scripps.edu/
Ifeoma Felicia Chukwuma .. Thank you for the answer. I need software for protein-lipid docking.
Riaz A. Khan and Anuraj Nayarisseri .. Thank you for the answe.
Now research fellow used it to prevent fungus in potato,may be potatoes gene effect.
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Please discuss someone told about fungus and allied others.
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Please note it
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https://www.cleanteqwater.com/resources/case-studies/gold-mine-australia/
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Cow dung manure is more powerful than artificial fertilizer.
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If the case of Irak is of December 2020 then i think I can suggest pl follow all the infection cause and death, already in our researchgate.
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Is this organic cow dung manure now important than artificial fertilizer.if good then why ?
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A group of students prefer frogs for dissection.
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If taken mice what benefits like humans will be available and human efficacy and mice?
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Molecular docking software/ websites?
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Good day, I am a student trying to work on Autodock for a project regarding Ligand-DNA interaction so i am quite new to molecular docking. i have followed tutorials and did all the steps...
28 July 2024 2,136 4 View
I wanted to know whether we can observe the synergistic/antagonistic/additive properties of combinations or mixtures of compounds through docking analysis. But during docking preparation any...
28 July 2024 7,413 6 View
A molecule shows the -11.6 kcal/mol and second one -8.0 kcal/mol so why molecule (A) revealed higher binding score. Please explain major factor involve in it.
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I have performed docking of proteins with two ligands, both ligands show affinity. I want to check the effect if we join both ligands and perform docking
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I have conducted virtual screening using Schrödinger on a database of 17,000 molecules. Unfortunately, I cannot use the system with the Schrödinger license at the moment. I am trying to find a way...
18 July 2024 2,881 4 View
I have used Schrödinger (Glide) for docking
13 July 2024 3,003 1 View
In the peptide-HLA-TCR docking process, can we express the result of peptide-HLA docking in RMSD and for peptide-HLA to TCR docking, can results be expressed in binding affinity?
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Silver Nanoparticles docking with alpha amylase and alpha glusidase .
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Hi all, I am conducting research on screening peptides (20-35 amino acids) with potential for treating dengue fever through protein-peptide docking methods. In the protein database, I found the...
10 July 2024 8,037 1 View