I have transcriptome data of chicken. I want to perform proteomics on string (https://string-db.org/cgi/network.pl). May i mention that graph and interaction in my article which i will get from string.com.
Please guide
carefully assign which genes or proteins you are interested in and then map to pathways.
Abhishek Kumar Sir, i appreciate your quick response. Kindly give me a little detail answer for it. I have assigned some up regulated and down regulated specific genes. May i go for Proteomic map on string.com? Scientifically is this map and interaction having any worth in the research?
Map top 200 up-regulared and top 200 down-regulared using string and then focus on pathways that come up.
Look into literature about it in your context like stress or flowering. Make set of gene of interests using literature mining and push that direction!
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