When I ran qPCR on my samples, some of them returned N/A results (I replicated it twice, and the replicated sample returned Cq value results), so I decided to run qPCR on the same samples again. The sample that previously gave N/A results turned out to have Cq values. What does this mean? And what are the possible issues that cause the first run to return N/A results in some samples?

 

 

Example (because I am not fluent in English, using the example will make it easier to understand that we are on the same page):

 

Sample A:

Gene A -> Cq: N/A

Gene B -> Cq: 36.55

Gene C -> Cq: 35.75

Sample A (replicated):

Gene A -> Cq: 34.78

Gene B -> Cq: 35.97

Gene C -> Cq: 36.12

 

And because gene A of sample A gave N/A as a result, I decided to run qPCR with the same sample again (to see if it could give me a Cq value).

Sample A:

Gene A -> Cq: 35.04

Gene B -> Cq: N/A

Gene C -> Cq: N/A

 

Sample A (replicated):

Gene A -> Cq: N/A

Gene B -> Cq: N/A

Gene C -> Cq: N/A

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