Hi,

I would like to study how a large protein complex interracts with a ligand. Due to the sheer size im afraid im limited to Coarse Grained.

Im guite confident about the protein, however the ligand scare me a bit. I found this paper Article Automated Parametrization of the Coarse-Grained Martini Forc...

however to low number of citations does not convince me.

Could anybody comment a bit on my methodology. Does it make any sense to try to parametrize the ligand in CG?

best

T

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