This question has been around for decades and it requires truly interdisciplinary efforts to answer.
The major ecosystems of the planet are critically important for humans and for all creatures, and they are currently subject to very strong pressure from climate change and from human-induced ecological disturbances, such as agriculture and invasive species. Ecosystems change both slowly and abruptly in apparent response to extreme events that may be embedded in long-term change. Ecosystems have strong feedback effects on the atmospheric budgets of heat, moisture, greenhouse gases and aerosols, and, therefore, on climate.
To find out how climate change will affect forests and dry-land vegetation, and how those changes will affect atmospheric composition, we need more observations. Observations need to be on timescales of decades or longer to reflect processes in the atmosphere and of the major ecosystems. They also need to span local, regional and global spatial scales. Finally, we need ecosystem models integrated with atmospheric models that work like real systems.
In the United States, there are efforts to study parts of this problem and to make the requisite observations, supported by the National Science Foundation, the Department of Energy, NASA, the U.S. Forest Service and NOAA. What remains to be done is to coordinate and invigorate these efforts, and to commit to solving the problem on the relevant time and space scales. We have certainly seen a lot of progress in the last few years, but it has mostly served to point to the serious the gaps in our knowledge.
Ecosystem health goes hand-in-hand with human health and economic vitality. Atmosphere-biosphere interactions are powerful and have vast implications.