life science
How I use the installed version of Gromacs 2018 from my home directory in CDAC-BRAF server? Please help me out..
08 September 2018 4,068 1 View
I'm using DSSP 2.0.4. command I used: dssp.exe -i 6NUL.pdb -o 6NUL.dssp what it is the next command to get the image file? Please give me suggestion..
07 August 2018 10,177 0 View
Hydrogen bond analysis
06 July 2018 6,521 2 View
gromacs
04 May 2018 2,093 0 View
I have taken The Bioinformatics Resources & Applications Facility (BRAF) at C-DAC. But donot know how to use it for MD simulation of protein-ligand complex using Gromacs program. Could...
04 May 2018 417 6 View
How can I transfer my files from my university server to BRAf server to perform MD simulation and how can I use environment module ??
03 April 2018 8,871 1 View
Program gmx mdrun, VERSION 5.1.2 Source code file: /build/gromacs-z6bPBg/gromacs-5.1.2/src/gromacs/mdlib/constr.cpp, line: 555 Fatal error: step 12: Water molecule starting at atom 61920 can not...
03 April 2018 4,146 0 View
I am follow this tutorial http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/complex/index.html In my case, protein with ligand simulated for 3ns. But after simulation the...
10 November 2017 6,403 6 View
what is the command for it???
07 August 2017 7,184 1 View
There is zinc in a catalytic site. So, I merge Protein_Zn_Ligand by using command: gmx make_ndx -f em.gro -o index.ndx > 1
07 August 2017 7,193 2 View
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24 July 2024 1,559 1 View
I saw a paper(PHAN V-T, ZHANG X, LI Y, et al. Microscale modeling of creep deformation and rupture in Nickel-based superalloy IN 617 at high temperature [J]. Mechanics of Materials, 2017, 114:...
16 July 2024 8,436 0 View
Due to the shifting ocean currents, the planet could be thrown off balance, altering the angle of rotation, and even causing the axis to shift, plunging us into chaos. In reality, it doesn't take...
15 July 2024 8,949 1 View
Must I cut them immediately with a microtome or can I keep them and use them over time?
30 June 2024 4,498 2 View
Sample type: Corn leaves and stem Bean leaves and stem
22 June 2024 2,082 3 View
For additional information, I am a master's student looking for a LCA software to do my thesis. So a less expensive one is my first priority, but if it is not able to help me with a clarity...
18 June 2024 8,376 3 View
So I am doing my thesis on the relation between cyberbullying perpetration and life satisfaction and if physical activity is a moderator. But in my moderation analysis the interaction is...
17 June 2024 6,400 2 View
conservation Conclusion: In summary, "Exploring Botany: An Inclusive Guide to Plant Biology" aims to be an invaluable resource for students, educators, and enthusiasts interested in delving into...
13 June 2024 5,807 1 View
Some Other Questions, if you can answer: What types of data are essential for conducting an LCA, and where can I find reliable data sources for water treatment technologies? How do you deal with...
11 June 2024 4,791 0 View
Hey there, I am currently conducting a life cycle assessment and as advised, I used different life cycle impact assessment (LCIA) methods to check for robustness of results. I found that when...
03 June 2024 8,431 2 View
