How to model a query protein having 3036 residues?

16 June 2022 1 7K Report

I need to model a protein having 3036 residues and it doesn't have any good template. I tried I-Tasser, Robetta, tr-ROSETTA and they have a limit of 1200 residues.

I also tried AlphaFold colab version and it had a limit of 2500 residues.

How can I model the whole protein having all the 3036 residues?

Waseem Ahmad Ansari

Nadim Ferdous Assalam o alaikum wa rahmatullahi wa barkatahu

You can use https://swissmodel.expasy.org/. Here, You can model protein of 5000 amino acids.

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