How to implement Hierarchical clustering using MapReduce?

More Soumyendu S Bandyopadhyay's questions See All

Help with GFP fusion protein pulldown?

I am trying to pulldown my GFP fused protein of interest using ChromoTek GFP-Trap® Magnetic Agarose. My protein is not binding to the beads. Expression of the GFP-fusion protein has been...

02 June 2024 8,541 0 View

How to do CCSD calculation with localized molecular orbitals in PySCF?

Hello everyone, One can obtain the canonical HF orbitals and localize them by Pipek, Ruedenberg or Boys method to obtain Localized Molecular Orbitals (LMO). One can perform CCSD calculations with...

07 December 2023 3,294 0 View

From which programs an user can obtain the 2-particle density matrix from a ccsd(t) calculation?

I have been using PySCF to obtain the two-particle density matrix from a ccsd(t) calculation. However, the calculation is not so memory efficient. But, one can obtain, store ,and manipulate the...

23 October 2023 2,576 0 View

Alexa488 synthesis-how easy it is?

Can anyone help sharing a robust method of sulfonation for the last step of Alexa488 synthesis? It seems quite tricky. I appreciate your help of any suggestion.

17 September 2023 3,200 0 View

Why 1.5 times amplification in between pga level and 100 Hz spectral acceleration level is observed NGA east GMMs (Vs=3000m/Sec)?

Dear All, I am going to use NGA-east attenuation relationship for a work. While I am using the NGA Atkinson Boore attenuation relationship for hard rock site ( Vs=3000 m/sec) an 1.5 time...

03 September 2023 916 1 View

Is there any one who can give me a chance to work in the field Image Processing ?

I'm Eagerly waiting to get a chance in the research field image processing

13 June 2023 8,365 5 View

Why many elemnets are deleted in Element deletation "Cohesive element" Abaqus?

Here, I have attached an out video of an delamination problem. Here, it is noticed that many elements are deleted at a time. But not able to figure out the reason. Any lead in this regards are...

19 October 2022 5,117 1 View

Is there a way to make RAM available on cloud?

We have seen and observed how cloud can be used to host unlimited data. Is there any possible method that the RAM of a computer can be connected to a cloud service so that computers do not run out...

11 October 2022 9,982 7 View

How to generate grid file in R-CRISIS for gridded seismisity?

In am going to perform PSHA analysis by gridded seismicity approach in R-Crisis. But during compilation, I am getting following errors. "bounding boxes of gridded seismicity and geometry are not...

13 September 2022 6,044 1 View

Principal Component Analysis ?

Any existing dataset and R code available for multi-covariate PCA, mostly dealing with different aspects of CT images? Any paper, repository or help will be appreciated.

07 February 2022 10,003 2 View

Has anyone applied Python in the field of textile engineering for data analysis, automation, or smart textiles?

I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...

10 August 2024 7,429 2 View

Request Python code?

Request Python code from this article : Gender equity of authorship in pulmonary medicine over the past decade. THANKS!

08 August 2024 6,242 2 View

Why does everyone use vs code?

Visual Studio Code (VS Code) has become a popular choice among developers for several reasons: 1. **Free and Open Source**: VS Code is free to use and open source, making it accessible to...

07 August 2024 7,013 4 View

How can i do multivariate Time Series forecast using MLP, ANFIS and LSTM?

I need the python code to forecast what crop production will be in the next decade considering climate and crop production variables as seen in the attached.csv file.

05 August 2024 2,977 3 View

Need help with my research project on open source SIEM and machine learning?

Hello everyone, I am currently working on a research project that aims to integrate machine learning techniques into an open source SIEM tool to automate the creation of security use cases from...

04 August 2024 3,196 2 View

How to do FEL analysis?

In molecular dynamics simulation, to get FEL analysis, I got an error. My Python version is 3.10.7. My input files are made with a lower version of Python. But the final command to generate the...

23 July 2024 5,646 2 View

Mass spectra averaging algorithm?

I am now developing a python module for ms2 database searching, would like to realize a function that similar to what Xcalibur did, choose multiple mass spectra and get an averaged spectra. But...

22 July 2024 3,975 1 View

Is there anything faster than Xarray or Pandas out there?

Hello, dear RG community. Personally, I have found Xarray to be excruciatingly slow, especially for big datasets and nonstandard operations (like a custom filtering function). The only suggestion...

15 July 2024 4,705 2 View

How can I extract the mathematical equation from existing Neural Network Model?

There exists a neural network model designed to predict a specific output, detailed in a published article. The model comprises 14 inputs, each normalized with minimum and maximum parameters...

14 July 2024 2,714 3 View

How to determine of metallic geometry in molecular dynamics simulation?

I have finish my MD simulation of a ligand-protein complex and I want to analyse the trajectory including the geometry of a metal. I have found that FindGeo tool could help with its python...

22 June 2024 4,045 4 View

Yalda Aryan

I think this link can help you:

https://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=3&cad=rja&uact=8&ved=0ahUKEwj0sbbH4sLLAhVC2hoKHbaHCsUQtwIILDAC&url=https%3A%2F%2Fwww.youtube.com%2Fwatch%3Fv%3Da-YP9O4gqIA&usg=AFQjCNHNEMJxwDKSwiYKrt9YmamIfDEdZw&bvm=bv.116636494,d.bGs

Purbarag Pathak Choudhury

Have a look at this article.

http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?arnumber=5372757&abstractAccess=no&userType=inst

http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?arnumber=6121313&abstractAccess=no&userType=inst

Article A New Agglomerative Hierarchical Clustering Algorithm Implem...