when I write my new paper, I am really confused by the description of the mutants. For example, when I tried to describe PrP106-126 A116S, is "A116S mutated PrP106-126" right? or the A116S mutation? or its mutant A116S? Thank you, I am confused now.
I have carried out MD simulations about membrane channel. In the process of MD simulations, the upper leaflet and the lower leaflet were separated as shown in figure 1. I tried to center the two...
09 October 2016 8,856 3 View
When I finished REMD by amber 10 package, I tried to extract temperature trajectories. However, I can not extract the trajectory more than 200 ns even 300 replica exchange molecular dynamics...
02 March 2014 5,427 2 View
When I tried to analyse the structural diversity of a peptide and its mutants, I found it is difficult to connect the probability of hydrogen bond formation of a residue with its propensity to...
01 February 2014 6,598 3 View
When I tried to construct the force field of a ligand, the resulting charge of the molecule is -0.000004, not zero. How does the minor charge affect the dynamics of its acceptor?
11 December 2013 5,567 0 View
How to calculate the RMSD values for a MD simulation using MOE?
07 August 2021 0 0 View
When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.
16 June 2021 0 0 View
Hi, I want to start testing pitfall trap to obtain ants samples, but I need to conduct molecular analysis on those insects. So, what kind of fluid can I use? Ethanol expires too early and I need...
03 March 2021 5,978 5 View
I have conducted and published a systematic review and meta-analysis research with the topic related to public health and health pomotion (protocol was registed in PROSPERO). Now we want to...
03 March 2021 8,920 3 View
Hello, I'm fairly new to ARENA and I have the following problem: I have two queues in which, in each queue, a different order type arrives (both having an arrival rate of exponential 10). Order...
02 March 2021 2,431 3 View
Hi everyone, I'm studying Marketing and I would like to write my PhD thesis on the topic of pricing. Any specific ideas?
02 March 2021 9,706 5 View