Dear All,
I have sequenced my genome from PacBio, they have provided me BAM sequence instead of FastQ. Kindly help me convert it to FastQ or Fasta sequence
You can use Samtools or reformat.sh from BBMap suite
I have tried installing BBMap suite but it didn't worked properly, can you suggest me any Web based tools or windows based tools as I am not an expert in Linux.
Just follow the instructions:
BBTOOLS - https://jgi.doe.gov/data-and-tools/bbtools/bb-tools-user-guide/installation-guide/
Samtools - http://www.htslib.org/download/
Dear Maas
Please check the galaxy web server once
Dear Kazi, I have tried Galaxy webservice but Samtools there are giving error to my BAM files.
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