How to compare 5 groups of sequences from different treatment in FASTA format?

26 April 2024 0 500 Report

I want to compare 5 groups of FASTA format proteins from my 5 separate treatments (each group has 200 sequences in FASTA format) in an automatic way and plot the Tree Construction or Heat map. I know some online tools but in most of them, I can upload just 1 group of my results. How upload automatic way all my 5 groups and compare them together?

Badges
Science topic

More Shiva Montasseri's questions See All

How do I define polynomial Cohesive Zone Model (CZM) in Abaqus?

Dear All, Does anyone know how we can define polynomial CZM in Abaqus? Please help me out. Thank you

01 July 2024 2,759 2 View

Im looking for data pertaining to oceanic currents, Sea surface temperature, chlorophyll, wind and salinity satellite data?

Dear All, Greetings for the day from Andaman! Kindly help me with the satellite data download link for Bay of Bengal pertaining to oceanic currents, Sea surface temperature, chlorophyll, wind, and...

22 May 2024 3,421 1 View

please propose me topics for investigating in acr and rft erea?

i want some good advises for my master thesis

06 May 2024 5,387 5 View

How to find Euler angles for orientation of Single crystals with respect to Lab Frame?

Hello everyone, I have a monoclinic C2 space group single crystal sample glued to a tenon plate. I know the surface normal direction and the edge plan of the crystal. Also, I know the XY plane of...

27 April 2024 5,955 2 View

What form of silica and particle size are suitable for fostering the growth of Diatom microalgae?

What form of silica and particle size are suitable for fostering the growth of Diatom microalgae? Can nano-silica be employed in the context of promoting Diatom growth?

19 December 2023 964 3 View

The role of neurocognitive science in HR?

I want to know how organizations can study the behavior's of employees through neuro cognitive science and what role is played by Hr in gathering the desired answer from the minds of the employees.

18 December 2023 2,387 4 View

"How Transformational Leadership leads to better Organizational Performance With the mediating role of Talent Management in context to Indian Psu."?

I need the key variables and Latent variables which help Transformational leadership to achieve better organizational Performance with the mediating role of talent management.

11 December 2023 1,695 1 View

For NMR experiment, what is the best solvent for protein and lipid?

I want to see the interaction between lipid NPs and proteins, but I am not sure which solvent is the best for both of them.

15 November 2023 1,400 8 View

Can anyone help me about SimaPro software?

I have problems in categories and use

19 September 2023 8,008 0 View

I need to get statistics on the use of plastic bags in chain stores in the city. How should I do sampling?

There are 75 chain stores in the city. What statistical method should I use?

27 June 2023 2,885 2 View

Are these cassettes suitable for expressing PETase mutant in E. coli?

I created two potential gene expression cassettes (constitutive and inducible) for expression of a mutant PETase gene on PeptiCloud using the version tree feature, which allows users to create...

28 July 2024 7,559 1 View

Please, what is the memory consumption of the Matlab function quad tree decomposition procedure [S = qtdecomp(I)] with respect to the input set I?

27 July 2024 5,455 2 View

Can we convert a thousand of FASTA sequence in numeric form in .csv format? If yes kindly send me the script for the same?

I have a .text file for various FASTA sequence , and i want to convert these sequences into a numeric file which will be in .csv format. OR I want to extract physiochemical properties(features)...

25 July 2024 3,650 2 View

Is it redundant to use both Random Forest and Decision Tree algorithms in the same regression project?

I am currently working on a regression model for a project and considering using both Random Forest and Decision Tree algorithms. Given that Random Forest is essentially an ensemble of Decision...

23 July 2024 4,306 3 View

What analyzes do you use to compare biodiversity in a square, at two different times?

e.g. moment one: square in its normal state moment two: square after cutting large trees and replacing them with dwarf trees.

12 July 2024 8,258 5 View

How to create a database management system of trees species using gis and remote sensing techniques?

I want to assess the trees in an rainforest habitat and collect every necessary detailed data by utilizing GIS and Remote sensing technology techniques. And build a database management system for...

11 July 2024 4,747 1 View

What are the relationship between insect biodiversity and durian tree? maybe from the nutrition contain or canopy tree, or other things?

I want to know what are the relationship that happen between insect biodiversity and durian tree

10 July 2024 8,230 1 View

How to download fasta files in "gene features" format from NCBI with multiple samples in R?

Hello, I was attempting to download some sequences data from NCBI. The format "gene features" could help me extract certain gene fractions using the names, but I found that it seems to be...

04 July 2024 9,875 1 View

Hello all Can we use different concentrations of lemon or orange extract to grow flowers in ornamental trees and shrubs?

I need more pdf on this topic

02 July 2024 6,988 1 View

What is the impact of the devastating Syrian war on the environment in Syria?

Syria has been suffering from a senseless, devastating war for more than 14 years, in which the combatants did not respect any sanctity of humans, trees, animals, cities, archaeological,...

19 June 2024 8,496 3 View