I am a student from Brunel University London, and I was looking to use the DIBaS dataset for my dissertation. However, recently it has not been accessible via this link: http://misztal.edu.pl/software/databases/dibas
If anyone has a copy, would it be possible for you to send it to me? My email is [email protected]
Kind Regards,
Alex Buswell.
Dear Alex,
your desired dataset is pretty large, there is 33 datasets and each one is about 130Mb, so you need to download them by yourself, fortunately the files are still on the server, just the page is inaccessible. I suggest you to upload them to a git repository for future and cite the owners and their paper in your repo, here are the download links:
- 1.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Acinetobacter.baumanii.zip -- Acinetobacter baumanii
- 2.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Actinomyces.israeli.zip -- Actinomyces israelii
- 3.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Bacteroides.fragilis.zip -- Bacteroides fragilis
- 4.0 https://doctoral.matinf.uj.edu.pl/database/dibas/Bifidobacterium.spp.zip -- Bifidobacterium spp.
- 5.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Candida.albicans.zip -- Candida albicans
- 6.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Clostridium.perfringens.zip -- Clostridium perfringens
- 7.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Enterococcus.faecium.zip -- Enterococcus faecium
- 7.2 https://doctoral.matinf.uj.edu.pl/database/dibas/Enterococcus.faecalis.zip -- Enterococcus faecalis
- 8.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Escherichia.coli.zip -- Escherichia coli
- 9.0 https://doctoral.matinf.uj.edu.pl/database/dibas/Fusobacterium.zip -- Fusobacterium spp.
- 10.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.casei.zip -- Lactobacillus casei
- 10.2 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.crispatus.zip -- Lactobacillus crispatus
- 10.3 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.delbrueckii.zip -- Lactobacillus delbrueckii
- 10.4 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.gasseri.zip -- Lactobacillus gasseri
- 10.5 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.jehnsenii.zip -- Lactobacillus jehnsenii
- 10.6 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.johnsonii.zip -- Lactobacillus johnsonii
- 10.7 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.paracasei.zip -- Lactobacillus paracasei
- 10.8 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.plantarum.zip -- Lactobacillus plantaru
- 10.9 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.reuteri.zip -- Lactobacillus reuteri
- 10.10 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.rhamnosus.zip -- Lactobacillus rhamnosus
- 10.11 https://doctoral.matinf.uj.edu.pl/database/dibas/Lactobacillus.salivarius.zip -- Lactobacillus salivarius
- 11.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Listeria.monocytogenes.zip -- Listeria monocytogenes
- 12.0 https://doctoral.matinf.uj.edu.pl/database/dibas/Micrococcus.spp.zip -- Micrococcus spp.
- 13.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Neisseria.gonorrhoeae.zip -- Neisseria gonorrhoeae
- 14.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Porfyromonas.gingivalis.zip -- Porphyromonas gingivalis
- 15.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Propionibacterium.acnes.zip -- Propionibacterium
- 16.0 https://doctoral.matinf.uj.edu.pl/database/dibas/Proteus.zip -- Proteus spp.
- 17.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Pseudomonas.aeruginosa.zip -- Pseudomonas aeruginosa
- 18.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Staphylococcus.aureus.zip -- Staphylococcus aureus
- 18.2 https://doctoral.matinf.uj.edu.pl/database/dibas/Staphylococcus.epidermidis.zip -- Staphylococcus epidermidis
- 18.3 https://doctoral.matinf.uj.edu.pl/database/dibas/Staphylococcus.saprophiticus.zip -- Staphylococcus saprophiticus
- 19.1 https://doctoral.matinf.uj.edu.pl/database/dibas/Streptococcus.agalactiae.zip -- Streptococcus agalactiae
- 20.0 https://doctoral.matinf.uj.edu.pl/database/dibas/Veionella.zip -- Veionella spp.
If you are using the DIBaS dataset please do not forget to refer in your publications to :
B. Zieliński, A. Plichta, K. Misztal, P. Spurek, M. Brzychczy-Włoch, and D. Ochońska Deep learning approach to bacterial colony classification PLOS ONE, 12(9), 1-14, 2017
Dear Alex James Hudson Buswell ,
Look the link, maybe useful.
Preprint An Automated Deep Learning Approach for Bacterial Image Classification
Regards,
Shafagat
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