Can I use Hellinger-transformed data to apply indval function with labdv package in R?

06 June 2015 0 9K Report

I use high throughput sequencing to analyse the microbial communities in different soil samples. In addition, I woulk like to use the function indval (labdv package, R, Dufrêne and Legendre) to find the indicator species for each group. However, I do not know if it is a problem to apply this function on hellinger-transformed data, or if I have to use it on raw data. I tried both of them, and there are some differences.

Thank you

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