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I am trying to do a geometry optimization of my structure with some constraints however when I check the .out file during the run it does not proceed to further stages. What I mean by that is that...
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What I wonder is that assuming I have two proteins namely protein-A, protein-B and protein A is somehow modified by protein B (simply an enzyme catalyzing the addition of -OH group to certain...
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I used MODELLER as a tool to accomplish comparative protein 3D structure prediction of my protein of interest. However I believe due to the poor alignment through the last 70 base pair, all gaps,...
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