Yunkun Dang

2 Questions 4 Answers 0 Followers

Questions related from Yunkun Dang

What are some tools for clustering genes of interest into one figure?

I did a HITS-CLIP and want to summrize the profile of all genes that have the peaks and scale them to a gene model to show the distribution of the peaks at either 5', 3' end or the middle of the gene.

04 April 2014 2,971 0 View

How to convert the bam file produced from bowtie/tophat into the histogram-like graphic view?

I am new to NGS field. I recently did a ChIP seq and a RNA seq (wt vs mutant). By using the bowtie/tophat tools I could be able to load the seq data on genome map and see the raw seq data on IGV...

02 February 2013 6,888 2 View