Ya-Zhou Shi

3 Questions 11 Answers 0 Followers

Questions related from Ya-Zhou Shi

What is the thermodynamic parameters of RNA mismatched base pairs?

As we all know, thermodynamic parameters for all possible double-helical nearest neighbors of Watson-Crick and GU wobble pairs have been determined by Turner's group. And, they also gave the...

11 November 2014 2,801 4 View

How can I create a pdb file of the standard RNA triplex?

Hi all, I need a pdb file of an RNA triplex to do Molecular Dynamics Simulations. Do you know what software or method can be used to create structures of a (the) standard RNA triplex? Thanks a lot.

11 November 2014 8,351 8 View

Can you provide experimental data for RNA hairpin stability in mixture ion solution?

I am developing a coarse-grained model of RNAs to quantitatively predict the stability of hairpins. For monovalent ions (such as NaCl), the model gives the reliable predictions for the stability...

06 June 2014 2,719 0 View