Vasantha Kumar M. V.

3 Questions 11 Answers 0 Followers

Questions related from Vasantha Kumar M. V.

How do I deal with Amber Unit error ( mutated Alanine )?

Dear Amberists, I have constructed a mutated alanine Amber unit called VALA (to generate mutated poly alanine molecule). The N and C terminal of the mutated unit remains the same...

07 April 2015 6,904 3 View

Why does AMBER give the error SIGSEGV: Segmentation fault - invalid memory reference?

I have tried to minimize the structure of an modified peptide in AMBER12 (AmberTool13), I got the following error message. Sander runs for few cycles of minimization and stops with following error...

11 March 2015 7,536 3 View

What is the lowest concentration of the protein one could use in the CD measurements, so that the total absorbance is <1 on 10mm path length Cuvette?

I wish to measure the CD experiments on a peptide to test the effect of Potassium Phosphate buffer (10mM). The CD region that I am interested in the range of 180-200nm.

28 November 2014 8,622 10 View