Sugandima Vidanagamachchi

3 Questions 11 Answers 0 Followers

Questions related from Sugandima Vidanagamachchi

How do I create ROC curve/s for detected protein biomarkers?

I have a set of biomarkers for a particular disease and I selected them based on their significance. However, I want to use ROC curves for validation of these biomarkers. I have the data of both...

14 October 2016 3,252 5 View

What should be the parameter settings for default_input.xml file in X!Tandem for 4-plex iTRAQ?

I have used the X!tandem software for proteomics data search and couldn't get the correct output for my current settings below. Residue modifications-> 144.1021@K Residue potential...

27 March 2015 8,995 6 View

What are free tools to convert a .wiff file into an .mzXML file in an MS experiment?

There exist tools like ProteinProhet and mzWiff (should have Analyst software installed) that are not freely available. Skyline is free, but doesn't seem to have a method of performing the...

18 December 2014 7,839 11 View