Sehrish Naz

4 Questions 8 Answers 0 Followers

Questions related from Sehrish Naz

Mercury (Hg) parameterization????

I want to run docking involving mercury metal ion can anyone suggest me which software support or have mercury parameters for efficient docking results.

15 February 2016 8,237 3 View

Is their any other alternate software for decoy generations except DUDE-E decoys??

Probably, there is some server error in DUDE-E decoy generation. As it keeps on sending empty files whenerver i had submitted by ligands for decoys generation. Can anybody tell me some alternate...

22 December 2015 8,290 5 View

How do I validate pharmacophore in absence of reported inhibitor?

I want to design protein-protein interaction modulator via virtual screening of large databases by utilizing structure-based pharmacophore of protein-protein complex. Can someone guide me how to...

01 October 2015 2,449 10 View

Can anyone guide me on how to do secondary structure analysis of amber trajectories?

I am unable to plot the secodnary structure graph plotting. Is there any script for this to run? please guide me

07 August 2015 972 6 View