Saptarshi Mondal

4 Questions 3 Answers 0 Followers

Questions related from Saptarshi Mondal

While analyzing QTL association using R-qtl (library(qtl), the QTL associations are inconsistent. LOD values are not reproducible. Is there any soln.?

I used library(qtl) in R for my QTL data analysis, but LOD values along with the marker positions are changing in each analysis. I tried setting a particular seed rate by set.seed() but it could...

26 December 2024 5,564 0 View

Why does Metaboanalyst 5.0 analyze up to 5000 features only? On what basis it choses 5000 features from a large dataset (eg. 15000 features)?

Recently, I am using Metaboanalyst 5.0 to find out differentially expressed metabolites. I have over 15000 features in my dataset. However, after successfully uploading the data in Metaboanalyst...

10 November 2023 4,414 0 View

How to determine the sample size of each bulks (eg.- Tol vs Sus) from a segregating population (screened for quantitative traits) in BSA?

For example, if a biparental mapping population is screened for abiotic stress tolerance (drought/salt) with physiological parameters.

04 May 2023 7,640 2 View

Activity of L-Proline vs D-Proline in plants?

I am curious to know if there is any significant difference in the activities of L-Proline vs D-Proline in abiotic stress (especially, salinity) tolerance in plants.

01 January 1970 6,703 3 View