Santhosh Paramasivam

2 Questions 2 Answers 0 Followers

Questions related from Santhosh Paramasivam

How to prepare topology file of a protein-Copper Oxide Nanoparticle complex/Nanoparticle to use in Gromacs Simulation?

I am currently doing simulation studies with protein and a Nanoparticle in GROMACS software. while preparing the topology file, I am getting so many errors and the force fields seems not...

05 March 2021 9,800 0 View

How to find the amino acids which are located in the particular protein binding site?

As i am working on protein-ligand docking, i want to input the x,y,z coordinates in autodock and to do that, i need the coordinates of aminoacids present in the binding site. So, PLease help me out.

04 January 2021 4,128 4 View