Saikat Pal

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Questions related from Saikat Pal

What is the reason behind the decrease of fluorescence peak intensity with increase of temperature or addition of well-known denaturant like urea?

I want to know the reason of decreasing fluorescence peak intensity with the rise of temperature or with the increase of concentration of denaturant like urea? Please give explanation with proper...

13 May 2019 9,603 4 View

What is the molar concentration of urea needed to denature ubiquitin completely?

I want to know the molar concentration of urea to denature ubiquitin completely so that I can simulate my urea-ubiquitin mixture. Can anyone help me by giving some references? Thanks in...

10 December 2018 9,852 0 View

In gromacs 53a6 force field, to generate tpr file of final md it shows "The sum of the two largest charge group radii(13.968721) is larger than rlist?

I am preparing a system of a protein with 60 molecules of cosolute molecule in aqueous medium............. This is a WARNING..........how can I sort out? In 'md.mdp' file 'rlist value is...

23 July 2018 1,743 3 View

How I can get number of ionic liquid molecules and number of water molecules from a concentration of say 2M to perform molecular dynamics simulation?

How I can calculate the number of ionic liquid molecules and the number of water molecules from a concentration of say 2M to do molecular dynamics simulation? I am thinking that my box size is 6...

08 May 2018 5,662 4 View