Radwa Elawadi

4 Questions 9 Answers 0 Followers

Questions related from Radwa Elawadi

Problem in Clustal-Omega alignment?

I am doing multiple sequence alignment using ClustalOmega for 600 dna covid-sequences with input characters around 30574 characters for each sequence. I am running it on windows cmd. I defined...

15 January 2022 3,009 5 View

PCA cross-validation for selecting the the pc component?

If i have 3datasets and make comparison between them and after calculation of pca components for each dataset. For instance, If D1 gave us 7 pc components , D2 gave 5pcs and D3 gave 4 pcs . How...

19 November 2021 5,460 4 View

Should the length of variables( sequences) generated from different Multiple Sequence Alignment Methods be on same size or different?

I am using three different multiple sequence alignment methods which are clustal omega, Mafft, and muscle. On sample of data , the length of generated sequences after alignment was on equal (same...

07 October 2021 8,411 1 View

Multiple Sequence Alignment

Question I am using three different multiple sequence alignment methods which are clustal omega, Mafft, and muscle. On sample of data , the length of generated sequences after alignment was on...

01 January 1970 5,259 4 View