How to calculate secondary structure propensity value? The value is given in dsp.xvg but how the percentage is calculated?

The gromacs tool do_dssp (freeware) uses the dssp program for a graphical output. In it's -cs output (scount.xvg) it gives you the secondary structure in the following form: @ s0 legend...

29 March 2024 8,365 2 View