Compressing sequences into haplotypes: which program allows a certain degree of polymorphism?

We have a big dataset of mtDNA COI sequences, around 1500 with around 30 insect species. We used DAMBE (http://dambe.bio.uottawa.ca/dambe.asp) to condense sequences into haplotypes. However, after...

09 September 2015 9,508 4 View