Pepijn Wilhelmus Kooij

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Questions related from Pepijn Wilhelmus Kooij

Can you use the FreeRate model for heterogeneity across sites in MrBayes?

Using IQTREE I received the most optimum models for my data to analyse phylogenetic tree-reconstruction. IQTREE is able to use, aside from the Gamma distribution for heterogeneity across sites...

01 June 2020 2,547 4 View

Does anyone have a published overview of the terminology of karyotism in fungi?

The terminology on karyotism of fungi is in my opinion very confusing. I'm looking for good explanations of terms like: mono-karyon, homo-karyon, di-karyon, hetero-karyon, multi-karyon,...

02 October 2014 1,876 2 View

I'm building a tree of some fungal strains in MEGA5. I sequenced two regions (25s/ITS). How can I combine the two sets in one tree analysis?

I have the sequences in two different sets, but while building the phylogenetic tree I would like to add both sets into the analysis.

06 February 2013 6,794 15 View