Partha Pratim Gogoi

2 Questions 4 Answers 0 Followers

Questions related from Partha Pratim Gogoi

Why do the compounds that contains Bromine after being docked through Autodock doesn't show interactions with Br and identifies as single fragment?

Greetings to anyone who reads this question. The problem that I am facing is whenever I try to run Autodock 4.2 and Autodock vina for my compounds that contains Bromine, the error that occurs is,...

01 July 2024 9,893 4 View

Hello Everyone. Can anyone help me with why autodock is not able to find the protein.pdbqt while running autogrid4?

All the files are placed in a specific folder in C drive. (it includes the protein and ligand pdbqt files, autodock4.exe, autogrid.exe and dat files from mgl tools 1.5.7). After repeatedly running...

26 December 2023 5,797 3 View