Neha Sanghi

4 Questions 7 Answers 0 Followers

Questions related from Neha Sanghi

How is the Poisson model used in calculating the p-value of called variants in deep sequencing data?

I am doing analysis of exom data and the major objective is the identification of variants. I want to know how the Poisson model is applied in calculating the p-value of the variants. It would be...

09 September 2012 1,100 1 View

Normalization of Illumina microarray data

I have Illumina data and am using genome studio for the analysis. When normalizaing the micro-array data through Genome studio, how do we decide which normalization to use? It offers four...

06 June 2012 7,577 4 View

Microarray Data Analysis, how to decide which statistical test to use?

I want to analyze microarray data generated from beadstudio software using illumina. I want to know how do we decide whether our data will follow some pattern as in normal distribution or...

05 May 2012 938 7 View

Can anyone tell me the software for doing differential expression analysis of RNA-seq data?

I want to do the differential expression analysis of RNA-seq data. My sample does not contain biological replicates. I tried using partek, but it does not calculate differential expression at gene...

05 May 2012 1,328 11 View