Md Mostafa Kamal

3 Questions 5 Answers 0 Followers

Questions related from Md Mostafa Kamal

Urgent help: Motif-x (rMotif-x) vs Motif-All, which one you preferably use for making final decision in motif analysis?

I am a first timer in phosphorylation motif analysis: Motif-X website has been down for over a year now, the alternative way is to use the r-motifx. Still, motif-x looks like the most widely...

28 November 2019 2,966 0 View

Urgent- LTQ Orbitrap XL help: Injection control or AGC settings. What is the relationship between FTMS AGCs and ITMS AGCs?

My intended AGC for full scan in Orbitrap (FTMS) = 5 x 10^5 and MS/MS scan in Iontrap (ITMS) 1x10^4. Here my question is when I set up these AGCs do I leave the other parameters as default, by...

08 July 2019 7,068 2 View

Will high temperature carbamylate peptides after trypsin digestion?

In my experiment I perform the in-solution digestion in 6 M Urea and 2 M thiourea buffer (UTU, pH 8.0 with Tris-HCl) as follows: Reduction> alkylation> Lys-c digestion for 3 hours at room...

01 December 2018 823 4 View