Md. Arju Hossain

5 Questions 5 Answers 0 Followers

Questions related from Md. Arju Hossain

How to generate Host-Bacteria protein-protein interaction (PPI) network?

I have a list of antibiotic resistance gene. Now I am going to generate host (human) and bacteria protein-protein interaction network. Actually I want to collect a list of host-bacteria protein,...

07 May 2022 622 0 View

Meta Analysis of GEO RNAseq data?

Hi everyone, I'm trying to use data from GEO in a meta-analysis study. I'm using two datasets from human RNAseq datasets. I found the two web tools 'ImaGEO' and 'ExAtlas' however, the tools...

22 January 2022 4,637 3 View

How to generate chord plot or circo diagram?

It would be extremely helpful if anyone can provide code for R programme and a supplementary excel file for the generation of chord plot or circo diagram. For better understanding, I have attached...

01 January 2022 6,048 3 View

Can you suggest any tools/database for analysis of pair-end RNA sequence raw data without Biojupies and Grein database?

How many data files can be uploaded at once. For example, 4 GB, 8 GB, or many. Actually, I want to upload a 32 GB raw data file at a time. Can it possible? Please suggest relevant databases or tools.

14 September 2021 7,197 2 View

I have a list of several Transcription factors and I need to know the specific type of these transcription factors?

For example, (TF) YY1 = inflammation responsive/ metabolic responsive/cell cycle regulation, which option is correct? Please, suggest any database links, where I can easily find the type of...

07 September 2021 3,882 2 View