Maryam Abedi

6 Questions 8 Answers 0 Followers

Questions related from Maryam Abedi

What is the best method to compare two gene expression profiles in point of ethnicity?

Dear all, I am working on RNA-seq data from two different cancer cohorts (different ethnicity). I want to compare the expression profile of these two ethnicity. PCA showed that these two cohorts...

01 January 2020 5,634 3 View

Do microRNAs regulate same genes in mouse and human organism?

Hi I have found some differentially expressed microRNAs in diabetic nephropathy mouse models and I collected their validated targets in mouse from some databases such as miRTarBase, Tarbase,...

09 September 2015 2,441 6 View

Who has worked with CluPedia Cytoscape plugin?

Hi Recently, I have worked with CluPedia plugin (Cytoscape software).I have built a protein-protein network but some nodes in my network don't have any edges. I'm sure this genes have interacting...

07 July 2015 6,870 0 View

How can interpret when target genes and microRNA have same expression in Real time PCR?

Recently, I have checked expression of some target genes of my interest microRNA , I expected that the expression of these target genes would reduce but all of them increased, How can I interpret it?

02 February 2015 8,941 6 View

What should I do if I have 2 reference genes in qPCR?

Hi,I've checked the expression of some microRNAs by qPCR and I've used 2 reference genes(2 snoRNAs) for normalization my data.But I found my Ref genes aren't match completely. It means one of...

07 July 2014 7,258 4 View

Could you introduce me to databases for microRNA pathway?

Hi I have some microRNAs that I want to know these miRNAs have rule in which pathways. I've used Diana database (mirpath) for them. Could you introduce me other databases for microRNA pathway?

07 July 2014 9,127 10 View