Maryam Yazdani

2 Questions 2 Answers 0 Followers

Questions related from Maryam Yazdani

What does an OTU mean in a functional gene investigation by different microbial techniques (e.g. Next Generation Sequencing, DGGE)?

Horizontal gene transfer (HGT) and some other phenomena, such gene duplication/divergence create significant differences in tree topologies among functional gene and 16S rRNA gene phylogenies...

19 May 2016 4,575 1 View

How can I filter a large fasta file (>500,000 nucleotide sequences) for a specific gene?

I am studying diversity in the nosZ gene in marine bacterial communities. Sequencing was done using Illumina Miseq, and after some preliminary analysis (e.g. quality trimming using Pear) I now...

17 November 2015 1,849 2 View