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Hello, everyone! Using PyMOL, I mutated arginine to citrulline by substituting O to one of the NH2 of the guanidino group. However, no forcefield can recognize the new oxygen. Does anyone know...
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Hello, After doing 100 ns MD simulations to a peptide, I want to determine the trajectory between the side chains of some residue pairs. For example: RSFFSFLGEAGFDG - I want to plot distance vs...
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