Mariana Graça Mora

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Questions related from Mariana Graça Mora

Is there any published article about the effects of using a minor allele frequency filter on the quantity of missing data per individual?

I performed two RAD-seq assemblies using ipyrad. I filtered the outputted .vcf file of each of the two assemblies using vcftools to limit the maximum quantity of missing data per locus to 60%. To...

13 March 2024 2,187 0 View

How to obtain a discernible biological pattern from two non comparable RAD-seq lanes?

I have a dataset composed of 63 individuals, all males of nine species of the cicada genus Tettigettalna. This dataset was sequenced in two separate RAD-seq lanes. Lane one contains 35 individuals...

28 March 2023 959 0 View