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Questions related from Marco Bolis
I'm working on an RNASeq batch of data and I'm interested in discriminating gene isoforms. I performed the analysis using the classic tuxedo suite bowtie+tophat+cufflinks. I've seen many papers...
21 March 2014 2,727 4 View
I could find some experiments searching for "Proteomic profiling by array" in GEO and array-express, but I'm wondering if there is more outside or if that is all for now?
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I determined the sensitivity of 40 breast cancer cell lines to a previously untested chemical compound. For each of the cell lines (before treatment) I have multiple Omics data: Gene Expression,...
05 March 2014 9,271 8 View
I created my first randomForest model (regression) in order to predict sensitivity to a particular drug in breast cancer cell lines. Total features were 35000 and I used default mtry for...
09 February 2014 7,856 3 View
I have several gene-expression datasets and would like to perform a meta-analysis by combining p-values using Fisher's method. I used to perform this using p-values derived from differential...
29 October 2013 1,838 2 View