Manuel Jara Espejo

2 Questions 4 Answers 0 Followers

Questions related from Manuel Jara Espejo

How can I convert a nucleotide position from cDNA to genomic position?

I am analyzing data from pseudouridine (https://www.nature.com/articles/nchembio.1836#MOESM157) modifications, where it is reported the position of modified U within cDNA. I need to find the...

09 January 2020 3,420 2 View

Do bigwig file coordinates represent the coordinates of all mapped reads from a RIP-seq experiment?

I am trying to identify enriched regions(peaks) between m6A RNA methylation RIP-seq and input data. For that, the human genome need to be split into non-overlapping 20 nt windows, then I need to...

12 October 2019 824 6 View