Lucas Bleicher

6 Questions 8 Answers 0 Followers

Questions related from Lucas Bleicher

What exactly are "BL21 gold" cells?

A protocol for protein expression mention they used BL21 gold cells, but I'm a bit confused after looking for them in suppliers - sometimes they are mentioned as if they were a specific type of...

08 August 2017 9,538 6 View

Explanations for the recent growth trends in Uniprot?

Until 2009, Swiss-Prot had an "exponential-like" growth but then it became clearly slower ( http://web.expasy.org/docs/relnotes/relstat.html ). I would assume that would be the result...

03 March 2016 5,481 0 View

Who's currently maintaining sreformat? Is there a good alternative elsewhere?

I manipulate a lot of huge alignments from PFAM in the rich, but extremely heavy, stockholm format. Sreformat was my command line tool of choice to convert from .sto to other formats (usually the...

09 September 2015 9,220 3 View

How do I get taxonomy IDs from Uniprot's five-character taxonomic identifier?

I'm surprised about this not being straightforward - where can I download a table or anything parseable from which I can get numeric taxonomic IDs from Uniprot's five-character identifiers? For...

07 July 2015 3,525 2 View

What are the most used metrics for co-localization?

Given a set of points in three-dimensional space, which are the most common ways of measuring if they are co-localized or not? E.g., a graph-based approach would be to build a graph using points...

02 February 2015 7,790 2 View

Is there an alternative to UCLA's Hotpatch as a functional site locator?

I have always been a fan of Bowie's lab software and Hotpatch is a great example of web-based tool which is useful for both teaching and research. However, their website...

02 February 2015 6,839 3 View