Laura Pulido

4 Questions 3 Answers 0 Followers

Questions related from Laura Pulido

How to change chain name (segid in pdb format) of gromacs topology and trajectory?

Hi everyone, I want to change the segid name of topology(in pdb format) and gromacs trajectory. To later generate a new topology and trajectory with the changed names. Do you know a way to do...

02 February 2020 9,758 1 View

How to calculate electrostatic potential across lipid bilayer trajectory from gromacs MD simulation ?

Hi all, Could someone tell me how to calculate the electrostatic potential across the z axis of a lipid bilayer ? Also, I would like to calculate the potential from the lipid headgroup to a...

01 January 2020 5,510 5 View

How to install BioGraPy on conda?

Hi everyone. I want to install the BioGraPy package on conda, so I can use it in python . Acording to the installation instructions, I've tried with git clone, pip install and conda install, but...

11 November 2017 850 2 View

How to use relational data bases to get information from biological databases?

Hi everyone. I'm currently using RNAcentral for my research project, but I don't know how to get information from the databases included in RNAcentral by using relational databases. I know that...

01 January 1970 4,493 3 View