Karim Mahnam

3 Questions 5 Answers 0 Followers

Questions related from Karim Mahnam

I want to compare native and mutated strcture via MD simulation. I should make mutation befor or after MD simulation ?

I made a model of a protein and want to study the effect of a mutation on a model structure via molecular dynamics simulation. I have two option: 1- produce mutation on native model structure and...

10 October 2019 4,773 9 View

Buffer overflow in autodock4?

Hello Dear friends I want to dock a ligand to a protein via autodock4. When I run Autodock4 , it says: buffer overflow detected ***: autodock4 terminated. The pdbq of my ligand has 70 atom and...

02 February 2018 5,380 2 View

Interleukin 16 ubiquitination?

Hello I want to MD simulation on interleukin 16 molecule. Should I attach ubiquitin to this molecule for MD simulation?. Thank you very much.

12 December 2016 1,787 0 View