Jose Antonio Aragon-Martin

3 Questions 6 Answers 0 Followers

Questions related from Jose Antonio Aragon-Martin

Bwa vs bowtie2 vs Novoalign, What are their advantages and disadvantages?

I am trying to analyse NGS data and I heard that these are the hot tools at the moment (bwa, bowtie2 and Novoalign). Are there other tools that can do the same? Am I supposed to be using all of...

12 September 2017 9,952 5 View

IGV vs UGENE vs Gap5, What are their advantages and disadvantages?

I am working with bam files from different NGS platforms and I am trying to use the following computer applications to visualise the reads: IGV (Broad Institute) UGENE (UniPro) Gap5 (staden...

08 September 2017 4,999 2 View

How can I create a gap5 database (Staden Package) with data from SOLiD?

The samples were done in SOLiD. The Staden Package program does not come with a tutorial as the gap4 program for sequence alignment, which would have been very useful. Please step by step would...

22 February 2014 3,952 2 View