Johnny Tam

3 Questions 1 Answers 0 Followers

Questions related from Johnny Tam

What is the standard way of preparing homolog sequences for a phylogenetic analysis?

I have two protein sequences with around 50% identity between them. I want to study the phylogenetic relationship between them. I came up with a method myself: Step 1: blast each of the sequences...

12 November 2018 3,610 2 View

Is there any read-mapping package that could map only the first half or the second half of reads?

I have a 150bp short read whole-genome library by analyzing which I am trying to discover the breakpoint of a possible insertional mutation in a plant genome. I am wondering Is there any...

17 October 2017 7,475 2 View

What are the principles of controlling bioinformatics procedures and balancing between screening efficiency and the risk of losing a real candidate?

I am trying to identify the point of insertion in the genome that may have caused the size difference in fruits between wild-type and mutant of a plant species (also mentioned here :...

14 October 2017 2,165 1 View