Johannes Plagge

2 Questions 2 Answers 0 Followers

Questions related from Johannes Plagge

Volcano Plot: How to calculate the FDR cut off for the -log10(p-value)?

As far as I know, I can plot either -log10(p-values) on the y-axis of a volcano plot, or the -log10(adjusted p-values) after adjusting them for example with Benjamini-Hochberg. When plotting...

14 February 2022 3,627 3 View

Volcano Plot: At what point do I log transform my data?

I have two treatment groups with 4 biological replicates each. I measured 100 lipid species in each of them and want to visualize the differences using a volcano plot. Which of these two ways is...

11 February 2022 9,503 3 View