Jan Pawel Jastrzebski

4 Questions 21 Answers 0 Followers

Questions related from Jan Pawel Jastrzebski

How might one calculate protein motif CRAC - cholesterol interactions?

Hello, I'm looking for the most easy calculation of the interaction energy between CRAC motif of protein and cholesterol. I found the paper, where is simple dockind, very short dynamics in vacuum...

10 October 2014 6,183 5 View

DOPE profiles alignment (Modeller) in R package

Has anyone prepared a script in R to plot the profiles of DOPE score in accordance with the alignment of compared structures? - description: http://salilab.org/modeller/tutorial/basic.html

12 December 2012 5,634 11 View

Which linux distribution do you recommend?

It is very similar question as Gustavo Rodriguez-Esteban asked (link below), but it is particulary about linux. Witch distribution do you recomend for work and for teaching of bioinformatics. What...

12 December 2012 4,419 84 View

Modeling C- and N- terminal segments in Modeller

How to model the ends of any protein in Modeller if I have no template and I can't use loop modeling?

12 December 2012 5,307 6 View