Jan Pawel Jastrzebski

5 Questions 20 Answers 0 Followers

Questions related from Jan Pawel Jastrzebski

How might one calculate protein motif CRAC - cholesterol interactions?

Hello, I'm looking for the most easy calculation of the interaction energy between CRAC motif of protein and cholesterol. I found the paper, where is simple dockind, very short dynamics in vacuum...

30 October 2014 8,341 4 View

Which linux distribution do you recommend?

It is very similar question as Gustavo Rodriguez-Esteban asked (link below), but it is particulary about linux. Witch distribution do you recomend for work and for teaching of bioinformatics. What...

28 December 2012 1,020 83 View

Modeling C- and N- terminal segments in Modeller

How to model the ends of any protein in Modeller if I have no template and I can't use loop modeling?

20 December 2012 2,810 5 View

DOPE profiles alignment (Modeller) in R package

Has anyone prepared a script in R to plot the profiles of DOPE score in accordance with the alignment of compared structures? - description: http://salilab.org/modeller/tutorial/basic.html

17 December 2012 3,063 10 View

I'm looking for any complex information (tutorial, book, web service) about scripts to connect the Modeller and LaTeX.

for example scripts for generating plots with full description for TeX, or generating tables from R->TeX, etc .

15 December 2012 4,143 1 View